AgrOmicSo
Agri-bio Omics Solution
AgrOmicSo is a user-friendly platform that streamlines the analysis of NGS data by automating key steps such as data registration, preprocessing, read mapping, and variant calling. Designed with accessibility in mind, the software allows even non-experts to perform complex genomic analyses with ease.

Client Program Download

Download the client program for each OS.

ZIP Program
Windows (.zip)

40.9M

Download Windows
EXE Program
Linux (.zip)

46.5M

Download Linux
EXE Program
macOS (.zip)

0M

Ready
macOS
Setup Program
Windows (.exe)

43.8M

Download Windows
Setup Program
Linux (.AppImage)

46.7M

Download Linux
Setup Program
macOS

0M

Ready
macOS
Server Program Download

Download the server program script and run the script.

Program Client Communication Script

Please run the script on the server in the background to enable communication between the server and client.

python server.py &


  • server.py

Scheduled Task Processing Script

Please run the script in the background so that the server program can process tasks according to the schedule.

python process.py &


  • process.py

AgrOmicSo Database File

This is the SQLite file used by the AgrOmicSo program.



  • agrDB.sql
Dataset

Download the dataset for testing purposes.

Arabidopsis thaliana(SRR21871726)

  •  SRR21871726_1M_1.fastq
  •  SRR21871726_1M_2.fastq

    • Homo sapiens(SRR18574455)

  •  SRR18574455_1.fastq
  •  SRR18574455_2.fastq

    • Xanthomonas oryzae pv. oryzicola GX01(11139_1)

  •  11139_1.fastq.gz
  •  11139_2.fastq.gz

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